![]() It is a dashboard application for Mac OS X that uses the JmolApplet. ProteinGlimpse is a free widget for visualizing macromolecules retrieved from the Protein Data Bank or from local disk.PFAAT - Protein Family Alignment Annotation Tool.PMOL - A Processing sketch using JMOL to load Molecules, and Processing to visualize them.Molecular Workbench - A Molecular Simulation Tool.MoCalc2012 is a Graphical User Interface for MOPAC, GAMESS(US), Firefly and ORCA that uses Jmol for displaying geometries, orbitals, surfaces, animations and vibrations using the Jmol scripting language.Janocchio is an applet and application in addition to using Jmol display capabilities, it calculates both H-H and H-C 3-bond NMR coupling constants and NOEs from a three-dimensional structure.J-ICE can deal with CASTEP, CRYSTAL09 (as well as 06, 03 and 98), QUANTUM ESPRESSO, VASP, Wien2k, FHI-aim, CIF, PDB and many others formats. J-ICE - a Jmol web- Interface for Crystallographic and Electronic Properties.iBabel - A GUI for cheminfomatics toolkit Openbabel, iBabel uses embeded applets to display structures.CheS-Mapper can create compound features, it clusters the dataset and embeds the compounds into 3D space. CheS-Mapper - A 3D viewer for small molecule datasets, that preprocesses the dataset.ChemPad renders in Jmol 3D models calculated on-the-fly from a formula sketched by hand in a tablet PC.CaGe ( mirror) - the "Chemical & abstract Graph environment" is a collection of graph generators for GNU Linux and Mac OS X, that uses Jmol as one of its visualizers.(There is another page for operating systems and software suites that include Jmol.) ![]() Jmol users, please add here your favorite Java applications that embed Jmol. Course Management Systems, Learning Management Systems, Virtual Learning Environments, e-Learning Platforms
0 Comments
Leave a Reply. |